Path: ...!3.eu.feeder.erje.net!2.eu.feeder.erje.net!feeder.erje.net!feeds.news.ox.ac.uk!news.ox.ac.uk!nntp-feed.chiark.greenend.org.uk!ewrotcd!news.eyrie.org!beagle.ediacara.org!.POSTED.beagle.ediacara.org!not-for-mail From: MarkE Newsgroups: talk.origins Subject: Re: Junk DNA fraction and mutational load Date: Wed, 29 Jan 2025 08:33:06 +1100 Organization: A noiseless patient Spider Lines: 56 Sender: to%beagle.ediacara.org Approved: moderator@beagle.ediacara.org Message-ID: References: <20250128134719.e06acfbf4215fd6442815ba7@127.0.0.1> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8; format=flowed Content-Transfer-Encoding: 8bit Injection-Info: beagle.ediacara.org; posting-host="beagle.ediacara.org:3.132.105.89"; logging-data="91959"; mail-complaints-to="usenet@beagle.ediacara.org" User-Agent: Mozilla Thunderbird To: talk-origins@moderators.isc.org Cancel-Lock: sha1:4KVeUbQn0ZOcsEGDjNgVur8Qi4g= Return-Path: X-Original-To: talk-origins@ediacara.org Delivered-To: talk-origins@ediacara.org id 896CD229871; Tue, 28 Jan 2025 17:42:28 -0500 (EST) by beagle.ediacara.org (Postfix) with ESMTPS id 56370229786 for ; Tue, 28 Jan 2025 17:42:26 -0500 (EST) by moderators.individual.net (Exim 4.98) for talk-origins@moderators.isc.org with esmtps (TLS1.3) tls TLS_AES_256_GCM_SHA384 (envelope-from ) id 1tcuHn-00000002WD0-2ZSd; Tue, 28 Jan 2025 23:42:23 +0100 (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature ECDSA (P-256)) (No client certificate requested) by smtp.eternal-september.org (Postfix) with ESMTPS id 15DAE60604 for ; Tue, 28 Jan 2025 22:42:21 +0000 (UTC) Authentication-Results: name/15DAE60604; dmarc=fail (p=none dis=none) header.from=gmail.com id D8619DC01CD; Wed, 29 Jan 2025 00:15:19 +0100 (CET) id B5943DC01D0; Wed, 29 Jan 2025 00:01:55 +0100 (CET) id F38C3DC01DE; Tue, 28 Jan 2025 23:31:09 +0100 (CET) id 14B62DC01D4; Tue, 28 Jan 2025 23:29:16 +0100 (CET) id 4689BDC01E1; Tue, 28 Jan 2025 23:23:08 +0100 (CET) id E66B6DC01E2; Tue, 28 Jan 2025 22:33:07 +0100 (CET) X-Injection-Date: Tue, 28 Jan 2025 22:33:07 +0100 (CET) Content-Language: en-US X-Auth-Sender: U2FsdGVkX1+kNgcUkDeL+PrNsGIyxUQhCNwx42mAsX8= In-Reply-To: <20250128134719.e06acfbf4215fd6442815ba7@127.0.0.1> HEADER_FROM_DIFFERENT_DOMAINS,NML_ADSP_CUSTOM_MED, RCVD_IN_VALIDITY_RPBL_BLOCKED,RCVD_IN_VALIDITY_SAFE_BLOCKED, SPF_HELO_NONE,SPF_PASS,T_SCC_BODY_TEXT_LINE,USER_IN_WELCOMELIST, USER_IN_WHITELIST autolearn=ham autolearn_force=no version=3.4.6 smtp.eternal-september.org Bytes: 5604 On 29/01/2025 12:47 am, Kerr-Mudd, John wrote: > On Tue, 28 Jan 2025 18:25:40 +1100 > MarkE wrote: > >> Dan Graur has argued that for purifying selection to prevent mutational >> load runaway, the functional fraction of the genome must be constrained >> (to 10-15%?). >> >> If the mutation rate was halved, would the allowable functional fraction >> double? Or is it not that simple? >> >> I posted a comment on Sandwalk criticising the latest Long Story Short >> video's treatment of the c-value paradox: >> https://sandwalk.blogspot.com/2025/01/intelligent-design-creationists-launch.html >> >> I also posted a query on this paper which argues against Graur's >> conclusion: "Mutational Load and the Functional Fraction of the Human >> Genome" >> https://academic.oup.com/gbe/article/12/4/273/5762616?login=false >> >> Larry Moran responded with "Graur refereed that paper and he now agrees >> with the general conclusion that the mutation load argument does not put >> a severe constraint on the fraction of functional DNA in the human genome." >> >> Is this now generally accepted? >> >> Note though the paper referenced has this conclusion: "We stress that >> we, in this work, take no position on the actual proportion of the human >> genome that is likely to be functional. It may indeed be quite low, as >> the contemporary evidence from species divergence and intraspecies >> polymorphism data suggests. Many of the criticisms of the ENCODE claim >> of 80% functionality (e.g., Doolittle 2013; Graur 2013) strike us as >> well founded. Our conclusion is simply that an argument from mutational >> load does not appear to be particularly limiting on f." >> > > > How does this help god the designer - he's preloaded DNA with junk, > maybe more, maybe less. Not a very good design is it? > > I should have been clearer: just a genuine query on this topic, not making a point either way. I've even highlighted my criticism of the DI video: "I'm an old earth creationist, and have generally agreed with this series of videos on origin of life by Long Story Short. However, in this case, I posted this critical comment on YouTube: 'Appreciate this series, but giving the impression that the c-value paradox is explained by polyploidy is misleading: “Some organisms with large genomes are not polyploid. For example, lungfish and salamanders have enormous genome sizes but are not consistently polyploid. Their large genomes are attributed more to the accumulation of repetitive elements and other non-coding sequences.' (Oddly, the comment is not visible when I'm not logged to a specific Google account)"